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The MoMA program opens with an explanation of how to use it.
The buttons on the right let you choose the binary files. I chose several, including some that aren't assemblies. This prompted a message telling me that the binaries that weren't assemblies would be skipped.
This particular program has several P/Invoke calls, as well as many unimplemented calls, making a port to Mono difficult.
When you click View Detail Report (see previous screen), the browser opens showing the details of the problems.
If you want, you can send your results to the Mono project so it can prioritize its efforts based on user feedback.
The last step of the program provides easy access to the site where you can download Mono and other tools.
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MoMA, or the Mono Migration Analyzer tool, helps users port Microsoft .NET programs to Mono with the ultimate goal of porting Windows software to Linux. In this slide show, eWEEK Labs explores MoMA, testing it on some popular .NET software.